Компиляция сервера Rstudio на el-capitan

Около года назад я запускал сервер rstudio на своем Mac. Тем не менее, я не использовал его много, поэтому я удалил его. Однако теперь мне нужно настроить его снова. Тем временем я перешел на el capitan и инструкции на https://iangow.wordpress.com/2013/05/01/rstudio-server-on-mac-os-x/ не работает. Сначала у меня были проблемы с компиляцией из-за OpenSSL и el capitan. Однако я считаю, что об этом позаботился [установка сервера Rstudio el capitan. Теперь, после sudo make install, он компилируется, но в конце выдает ошибку, которую я не могу расшифровать. Любые идеи, что здесь не так?

РЕДАКТИРОВАТЬ 1- в соответствии с предложением удалить предложил удалить каталог rstudio и выполнить чистую установку. Однако в конце я получаю ту же ошибку.

    clang: error: linker command failed with exit code 1 (use -v to see invocation)
    make[2]: *** [src/cpp/session/rsession] Error 1
    make[1]: *** [src/cpp/session/CMakeFiles/rsession.dir/all] Error 2
    make: *** [all] Error 2




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person Misha    schedule 01.11.2015    source источник
comment
Вы пытались удалить кеш CMake или уничтожить папку сборки и воссоздать ее?   -  person Jonathan    schedule 03.11.2015


Ответы (1)


У меня возникла та же проблема после обновления OS X на моем Mac. Обратите внимание, что на моем Macbook уже был Homebrew.

Ниже показано, что я сделал для установки RStudio Server:

  1. Установите новую версию Xcode
  2. brew reinstall gcc
  3. brew install rstudio-server
person kimman    schedule 23.01.2016